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Chemistry

Molecules, periodic table, reactions, pH scale, and titration

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Hückel π-MO (Butadiene & Benzene)

Secular matrix H = αI + βA; eigen-energies and LCAO maps on the π skeleton.

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MO Diagram: Homonuclear Diatomics (H₂–O₂)

σ/π ladder with Li–N vs O ordering; bond order from valence MOs; O₂ π* unpaired → paramagnetism.

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Wigner Function (Coherent vs Squeezed)

Phase-space quasi-probability W(x, p) for a single-mode Gaussian quantum state: coherent |α⟩, displaced-squeezed D(α)S(ξ)|0⟩, and thermal. The 1σ ellipse rotates by half the squeeze phase θ/2 and shrinks below the vacuum floor along one quadrature — the basic picture of CV quantum optics.

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Coherent State |α⟩ in a Harmonic Oscillator

Animated Gaussian wavefunction of a coherent state |α⟩ in a 1-D harmonic well: rigid σ = 1/√2 packet whose centroid traces the classical orbit ⟨x⟩(t) = √2|α|cos(ωt − φ_α). Side-by-side phase space, |ψ(x,t)|², and ⟨x⟩(t) trace.

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WKB / Bohr–Sommerfeld Quantization

Semiclassical bound-state energies for arbitrary V(x): harmonic, quartic, Morse, double-well, asymmetric and square wells. Bisection on the action ∫√(2m(E−V))dx = (n+½)πℏ gives the WKB ladder; compare with the exact harmonic ladder ℏω(n+½).

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Qubit Decoherence: Lindblad / T₁ T₂

Two-level Bloch master equation in the rotating frame with drive Ω, detuning Δ, T₁ relaxation and T₂ transverse decay. The Bloch vector spirals inside the sphere — the geometric picture of decoherence with live populations P(|0⟩), purity Tr ρ², and time traces of u_x, u_y, u_z.

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Ramsey Fringes (Atomic Clock)

Separated-oscillating-fields sequence π/2 — τ — π/2 with detuning Δ and coherence T₂. Sweep τ or Δ to see P(|1⟩) = ½(1 − cosΔτ · e^{−τ/T₂}) — fringe period 2π/Δ, exponential T₂ envelope; the Bloch sphere animates each stage. Foundational to atomic clocks and Ramsey interferometry.

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CHSH Bell Inequality Test

Monte-Carlo of the singlet state |Ψ⁻⟩ at four measurement angles (a, a′, b, b′): the running estimate Ŝ approaches the Tsirelson bound 2√2 ≈ 2.828 at the canonical Bell angles (0°, 90°, 45°, −45°), violating the local-realist limit |S| ≤ 2 — quantum entanglement made statistically visible.

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Hong–Ou–Mandel Two-Photon Dip

Two indistinguishable photons enter opposite ports of a 50/50 beam splitter and bunch into the same output: coincidence probability P_c(δτ) = ½(1 − V·exp(−(δτ/τ_c)²)) (Gaussian) or Lorentzian. Drag the delay δτ to walk through the dip; live Monte-Carlo converges to the analytic curve. Visibility V = indistinguishability.

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Kronig–Penney Bands & Brillouin Zone

Periodic δ-comb model of a 1-D crystal: cos(ka) = cos(qa) + (P/qa) sin(qa). Find allowed energy bands and forbidden gaps from the |·|≤1 corridor, then watch each band fold into the first Brillouin zone k ∈ ±π/a. Free-electron parabola overlaid for reference.

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Phonon Dispersion: 1-D Mass–Spring Chain

Monoatomic ω = 2√(K/m)|sin(ka/2)| or diatomic acoustic/optical branches from alternating masses; ω(k) and group velocity v_g = dω/dk in the first Brillouin zone with animated lattice snapshot.

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Debye vs Einstein Heat Capacity

Molar C_V(T): Debye integral → T³ law at low T and 3R Dulong–Petit at high T; compare with Einstein single-frequency model and toggle curves on one plot.

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Anderson Localization (1D Tight-Binding)

Random onsite disorder W on a 1-D chain: diagonalize H, plot |ψ|² eigenstates, IPR vs energy, and localization length estimates (RMS and exponential fit).

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Bloch Oscillations & Wannier–Stark Ladder

1-D tight-binding electron in uniform field E: semiclassical k(t), Bloch-periodic x(t), and finite-chain Wannier–Stark ladder with spacing ≈ eEa.

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Graphene Tight-Binding Band Structure

Honeycomb π tight binding: E(k) along Γ–M–K–Γ, Dirac cones at K and K′ when Δ=0, gap 2Δ from sublattice stagger, and a Brillouin-zone energy map.

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Quantum Hall Edge States & σ_xy Plateaus

Integer QHE: chiral edge channels and skipping orbits in a Hall bar, filled Landau levels vs μ, and quantized Hall conductance plateaus σ_xy = ν_f e²/h.

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Drude–Sommerfeld Transport

Free-electron Drude model: scattering time τ, mobility μ, σ(ω), mean free path ℓ = v_Fτ, skin depth δ(ω), and DC Hall σ_xx(B), σ_xy(B).

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2D Box: Eigenstates & Degeneracy

Particle in a 2-D rectangular infinite well: ψ_{n_x,n_y} ∝ sin(n_xπx/L_x)sin(n_yπy/L_y), E ∝ (n_x/L_x)² + (n_y/L_y)². Toggle a square box (L_x = L_y) to expose the (n_x, n_y) ↔ (n_y, n_x) accidental degeneracy and watch the doublets split as the box deforms.

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Landau Levels in a Magnetic Field

Charged particle in a uniform B-field: equally-spaced Landau ladder E_n = ℏω_c(n+½) with cyclotron frequency ω_c = qB/m, magnetic length ℓ_B = √(ℏ/qB) and orbit radius r_n = ℓ_B√(2n+1). Animated cyclotron orbit + linear-in-B fan diagram; the n_B = qB/h degeneracy underlies the quantum Hall effect.

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Maxwell–Boltzmann vs Eₐ

Translational energy density f(E); shaded fraction above activation energy; compare Arrhenius exp(−Eₐ/RT).

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Water P–T Phase Diagram

Qualitative fusion, sublimation, vapor pressure up to critical point — probe labeled regions (pedagogical curves).

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Close Packing FCC / BCC / HCP

Coordination numbers, maximal packing η, schematic ABC vs AB stacking beside a BCC cubic cell.

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Chromatography Column

Partition chromatography cartoon: Gaussian bands separate as retention on the stationary phase differs.

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Michaelis–Menten Kinetics

v vs [S] saturation and Lineweaver–Burk line from slope Km/Vmax and intercept 1/Vmax.

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DNA Replication (Schematic)

Fork, leading vs lagging strand, Okazaki fragments — static labeled cartoon.

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Polymer Random Coil

Lattice random walk R_g with Flory exponent ν slider (scaling hint vs Gaussian ν = ½).

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Belousov–Zhabotinsky (Excitable)

Greenberg–Hastings excitable cellular automaton: target waves and rotating spirals as a qualitative BZ analogue.

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Radioactive Decay & Chain

N(t) from half-life T₁/₂; optional parent → daughter → stable Bateman ODEs (RK4, normalized).

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Le Châtelier Principle (Gas)

N₂ + 3H₂ ⇌ 2NH₃: T, V, add/remove species; Q vs K and relaxing mole bars.

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VSEPR Molecular Shapes (3D)

Bonding vs lone pairs on a central atom: AXₙEₘ notation, electron geometry, and ball–lone-pair model.

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Galvanic (Voltaic) Cell

Two half-cells, salt bridge, voltmeter; E°cell and Nernst E from ion concentrations (pedagogical E°).

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Hess's Law (Enthalpy Paths)

Two-step vs direct ΔH on an enthalpy diagram; sum must match declared overall ΔH.

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Collision Theory (2D Particles)

Hard-disk gas: elastic hits vs an activation speed threshold; T and Eₐ vs exp(−Eₐ/RT).

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Crystal Field Splitting (Oct / Tet)

Δ_t = (4/9)Δ_o; HS vs LS d⁴–d⁷ from CFSE + pairing P; toy complex hue vs Δ_oct.

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Unit Cell SC / BCC / FCC

Conventional cubic cells; yaw–pitch projection — lattice sites before basis detail.

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Sequential Stern–Gerlach

Two SG devices: P(up on SG₂) = cos²(θ/2) or sin²(θ/2) after |±z⟩ filter.

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Molecule Viewer (3D)

Common molecules in 3D. Rotate, zoom. Ball-and-stick models.

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Periodic Table

Click element for properties, electron config, and uses.

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Electron Configuration

Fill orbitals visually with Aufbau principle animation.

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Balancing Equations

Interactive practice. Drag coefficients. Check balance.

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pH Scale

Slider from 0 to 14 with common substances and color indicators.

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Titration Simulator

Add base to acid. pH curve in real time. Find equivalence point.

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Reaction Rate

Arrhenius k(T), order 0/1/2, [A](t) curves and particle tank.

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Orbital Shapes (Schematic)

2D |ψ|² colormap for s-, p-, and d-like angular patterns (pedagogical, not HF).

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Particle in a 1D Box

Superposition of n=1 and n=2: time evolution of |Ψ|² and ⟨E⟩ (model units).

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Gaussian Wave Packet

Free spreading: σ(t) from dispersion with ℏ = m = 1; uncertainty intuition.

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Quantum Well Eigenstates (Box & HO)

Stationary ψ_n and |ψ_n|² for infinite square well or harmonic oscillator; optional phase animation (ℏ = 1).

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Rectangular Barrier Tunneling

Analytic transmission T(E) vs energy for a 1D barrier; tunneling below V₀ and resonances above (ℏ = m = 1).

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Stern–Gerlach Beam (Cartoon)

Silver-like beam through an inhomogeneous B-field: atoms deflect to two detectors illustrating S_z = ±ℏ/2.

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Bloch Sphere & Rabi Drive

Two-level Bloch vector with du/dt = u × ω, ω = (0, Ω, Δ); u_x–u_z view, Rabi flopping when Δ = 0.

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Hydrogen |ψ|² (xz slice)

Coulomb hydrogen Z=1: |R_nl|² × |Y_lm|² colormap in the xz plane for textbook n,l states.

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Hydrogen: Balmer / Lyman Lines

Rydberg wavelengths 1/λ = R_H (1/n_f² − 1/n_i²); Lyman, Balmer, and Paschen series on a linear spectrum strip.

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Heisenberg Product σ_x σ_p

Gaussian position and momentum widths with ℏ = 1; momentum “excess” over the minimum-uncertainty floor.

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β⁻ Decay: Electron Spectrum

Continuous kinetic-energy spectrum up to endpoint Q (allowed-decay phase space); missing energy carried by the antineutrino.

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Nernst Equation

E = E° − (RT/nF) ln Q: sliders for E°, n, T, and reaction quotient.

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Buffer Solution

Henderson–Hasselbalch vs strong acid: pH curve as H⁺ is added (mole model).

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Acid Dissociation α(pH)

α = 1/(1+10^(pKa−pH)); half-equivalence at pH = pKa; curves for α and 1−α vs pH.

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Born–Haber Cycle (NaCl & CaO)

Step ΔH° table and enthalpy ladder; lattice energy U = Σ(gas-ion steps) − ΔH_f°.

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Frost Circle & Aromaticity (4n+2)

Inscribed n-gon on Hückel π energies; π count vs 4k+2 / 4k; Aufbau filling.

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Henry's Law (Gas Solubility)

p = k_H c with k_H(T) from ΔH; c vs T at fixed p (ideal-dilute sketch).

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Gray–Scott Patterns

Reaction–diffusion u,v; coral / mitosis / worms / spirals; D_u, D_v, Δt.

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Gibbs Free Energy

ΔG = ΔH − TΔS; sign vs spontaneity at constant p,T (no Q or K).

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